Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EZ449_15770 | Not Available | Negative | 3692106 - 3693689 | 61190.4 |
| hypothetical protein | EZ449_15780 | Not Available | Negative | 3696823 - 3697929 | 41230.6 |
| glycoside hydrolase family 97 protein | EZ449_15785 | Not Available | Negative | 3698079 - 3700043 | 74018.4 |
| glycoside hydrolase family 28 protein | EZ449_15790 | Not Available | Negative | 3700099 - 3701631 | 55515.0 |
| c-type cytochrome | EZ449_15795 | Not Available | Negative | 3701628 - 3703316 | 61212.1 |
| glycoside hydrolase | EZ449_15800 | Not Available | Negative | 3703332 - 3704789 | 53120.8 |
| glucose dehydrogenase | EZ449_15805 | Not Available | Negative | 3704917 - 3706167 | 46088.8 |
| glycoside hydrolase family 2 | EZ449_15810 | Not Available | Negative | 3706185 - 3708929 | 103223.0 |
| discoidin domain-containing protein | EZ449_15815 | Not Available | Negative | 3709245 - 3709502 | 9488.05 |
| crp/fnr family transcriptional regulator | EZ449_15820 | Not Available | Positive | 3710394 - 3710987 | 23062.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

