Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | EZ449_15720 | Not Available | Negative | 3678175 - 3678570 | 15171.7 |
| hypothetical protein | EZ449_15725 | Not Available | Negative | 3678828 - 3679430 | 22152.9 |
| hypothetical protein | EZ449_15730 | Not Available | Negative | 3679486 - 3679908 | 15271.0 |
| hypothetical protein | EZ449_15735 | Not Available | Negative | 3679905 - 3680309 | 15191.6 |
| glycoside hydrolase family 97 protein | EZ449_15740 | Not Available | Negative | 3681258 - 3683387 | 80426.9 |
| alpha-amylase | EZ449_15745 | Not Available | Negative | 3683429 - 3684811 | 50833.6 |
| susf/suse family outer membrane protein | EZ449_15750 | Not Available | Negative | 3684854 - 3685930 | 38253.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_15755 | Not Available | Negative | 3685942 - 3687426 | 54769.3 |
| susc/raga family tonb-linked outer membrane protein | EZ449_15760 | Not Available | Negative | 3687435 - 3690389 | 106432.0 |
| hypothetical protein | EZ449_15765 | Not Available | Positive | 3690794 - 3692116 | 49967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

