Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | EZ449_15670 | Not Available | Positive | 3661451 - 3662980 | 55622.6 |
| response regulator transcription factor | EZ449_15675 | Not Available | Negative | 3662997 - 3663776 | 30063.8 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_15680 | Not Available | Negative | 3663973 - 3665685 | 62053.0 |
| tonb-dependent receptor | EZ449_15685 | Not Available | Negative | 3665699 - 3668776 | 110920.0 |
| fecr family protein | EZ449_15690 | Not Available | Negative | 3669279 - 3670325 | 40084.6 |
| rna polymerase sigma-70 factor | EZ449_15695 | Not Available | Positive | 3670551 - 3671138 | 22997.0 |
| alpha-n-arabinofuranosidase | EZ449_15700 | Not Available | Negative | 3671912 - 3673501 | 58940.5 |
| hypothetical protein | EZ449_15705 | Not Available | Negative | 3673554 - 3673784 | 8632.56 |
| hypothetical protein | EZ449_15710 | Not Available | Positive | 3674260 - 3675591 | 49192.2 |
| glycoside hydrolase family 2 | EZ449_15715 | Not Available | Positive | 3675615 - 3677387 | 67820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

