Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | EZ449_15620 | Not Available | Negative | 3647669 - 3648349 | 25755.3 |
| tolc family protein | EZ449_15625 | Not Available | Negative | 3648343 - 3649632 | 47328.6 |
| dha2 family efflux mfs transporter permease subunit | EZ449_15630 | Not Available | Negative | 3649652 - 3651232 | 57131.5 |
| hlyd family secretion protein | EZ449_15635 | Not Available | Negative | 3651263 - 3652312 | 37853.0 |
| marr family transcriptional regulator | EZ449_15640 | Not Available | Positive | 3652462 - 3652932 | 17795.2 |
| mannonate dehydratase | EZ449_15645 | Not Available | Negative | 3653213 - 3654409 | 45119.1 |
| hypothetical protein | EZ449_15650 | Not Available | Negative | 3654456 - 3654791 | 12779.3 |
| hypothetical protein | EZ449_15655 | Not Available | Negative | 3654857 - 3656944 | 79842.4 |
| hypothetical protein | EZ449_15660 | Not Available | Negative | 3657289 - 3659685 | 89956.7 |
| glycoside hydrolase | EZ449_15665 | Not Available | Positive | 3659892 - 3661397 | 55241.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

