Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_15500 | Not Available | Negative | 3619111 - 3619980 | 33302.3 |
| hypothetical protein | EZ449_15510 | Not Available | Negative | 3620999 - 3622651 | 62739.9 |
| conjugal transfer protein trag | EZ449_15515 | Not Available | Negative | 3622735 - 3624756 | 76081.3 |
| relaxase | EZ449_15520 | Not Available | Negative | 3624760 - 3625998 | 46870.2 |
| plasmid mobilization relaxosome protein mobc | EZ449_15525 | Not Available | Negative | 3625983 - 3626390 | 15557.1 |
| three-cys-motif partner protein tcmp | EZ449_15535 | Not Available | Positive | 3627380 - 3628504 | 42958.1 |
| phage gp37/gp68 family protein | EZ449_15540 | Not Available | Positive | 3628505 - 3629233 | 28002.9 |
| atp-binding protein | EZ449_15545 | Not Available | Negative | 3629234 - 3630595 | 50800.3 |
| error-prone repair protein imua | EZ449_15550 | Not Available | Positive | 3630769 - 3631521 | 27901.5 |
| dna polymerase y family protein | EZ449_15555 | Not Available | Positive | 3631518 - 3633011 | 56845.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

