Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | EZ449_15350 | Not Available | Negative | 3584564 - 3585709 | 43727.2 |
| hypothetical protein | EZ449_15355 | Not Available | Negative | 3585706 - 3586014 | 12003.2 |
| hypothetical protein | EZ449_15360 | Not Available | Negative | 3586178 - 3586534 | 13299.5 |
| hypothetical protein | EZ449_15365 | Not Available | Negative | 3586522 - 3587694 | 43257.2 |
| hypothetical protein | EZ449_15370 | Not Available | Negative | 3587829 - 3588434 | 23042.8 |
| hypothetical protein | EZ449_15375 | Not Available | Negative | 3588436 - 3588930 | 18253.2 |
| hypothetical protein | EZ449_15380 | Not Available | Negative | 3588938 - 3589879 | 35449.9 |
| response regulator transcription factor | EZ449_15385 | Not Available | Negative | 3589891 - 3590736 | 32186.8 |
| response regulator transcription factor | EZ449_15390 | Not Available | Positive | 3591070 - 3591786 | 27349.3 |
| rhodanese-related sulfurtransferase | EZ449_15395 | Not Available | Negative | 3591880 - 3592185 | 11612.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

