Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | EZ449_15295 | Not Available | Negative | 3568495 - 3568866 | 14059.0 |
| duf4835 family protein | EZ449_15300 | Not Available | Negative | 3569200 - 3570090 | 33351.6 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EZ449_15305 | Not Available | Negative | 3570087 - 3571283 | 43152.6 |
| rna polymerase rpb6 | EZ449_15310 | Not Available | Negative | 3571361 - 3571687 | 12545.7 |
| outer membrane protein assembly factor bamd | EZ449_15315 | Not Available | Negative | 3571695 - 3572639 | 36144.7 |
| duf3829 domain-containing protein | EZ449_15320 | Not Available | Positive | 3572981 - 3573904 | 35065.6 |
| helix-turn-helix domain-containing protein | EZ449_15330 | Not Available | Negative | 3575258 - 3575419 | 6403.88 |
| hypothetical protein | EZ449_15335 | Not Available | Negative | 3576814 - 3577503 | 26581.0 |
| rhs repeat-associated core domain-containing protein | EZ449_15340 | Not Available | Negative | 3577514 - 3580693 | 117440.0 |
| hypothetical protein | EZ449_15345 | Not Available | Negative | 3580743 - 3584384 | 134586.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

