Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_15245 | Not Available | Positive | 3548999 - 3549868 | 30859.4 |
| hypothetical protein | EZ449_15250 | Not Available | Positive | 3549865 - 3551619 | 64678.1 |
| hypothetical protein | EZ449_15255 | Not Available | Positive | 3551633 - 3558544 | 254732.0 |
| hypothetical protein | EZ449_15260 | Not Available | Positive | 3558553 - 3560550 | 75276.1 |
| carboxypeptidase-like regulatory domain-containing protein | EZ449_15265 | Not Available | Negative | 3560588 - 3561829 | 47332.1 |
| carboxypeptidase-like regulatory domain-containing protein | EZ449_15270 | Not Available | Negative | 3561910 - 3563145 | 46975.3 |
| hypothetical protein | EZ449_15275 | Not Available | Negative | 3563183 - 3563944 | 28846.3 |
| energy transducer tonb | EZ449_15280 | Not Available | Negative | 3563961 - 3564710 | 27994.2 |
| dna repair protein recn | EZ449_15285 | Not Available | Negative | 3564745 - 3566397 | 61126.3 |
| m56 family metallopeptidase | EZ449_15290 | Not Available | Negative | 3566500 - 3568401 | 72799.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

