Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_15195 | Not Available | Negative | 3537008 - 3537328 | 12030.6 |
| bluf domain-containing protein | EZ449_15200 | Not Available | Positive | 3537471 - 3537941 | 18252.6 |
| hypothetical protein | EZ449_15205 | Not Available | Positive | 3538084 - 3538551 | 17692.1 |
| atp-dependent clp protease atp-binding subunit | EZ449_15210 | Not Available | Positive | 3539035 - 3541587 | 94887.6 |
| cap domain-containing protein | EZ449_15215 | Not Available | Positive | 3541765 - 3542277 | 18293.2 |
| hypothetical protein | EZ449_15220 | Not Available | Negative | 3542324 - 3543196 | 33608.0 |
| pa0069 family radical sam protein | EZ449_15225 | Not Available | Negative | 3543234 - 3544301 | 40643.0 |
| response regulator transcription factor | EZ449_15230 | Not Available | Positive | 3544421 - 3545137 | 27109.7 |
| hypothetical protein | EZ449_15235 | Not Available | Positive | 3545138 - 3547246 | 79284.6 |
| hypothetical protein | EZ449_15240 | Not Available | Positive | 3547344 - 3547946 | 22623.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

