Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yccf domain-containing protein | EZ449_01390 | Not Available | Positive | 334404 - 334772 | 13422.2 |
| duf2183 domain-containing protein | EZ449_01395 | Not Available | Negative | 334947 - 335921 | 37891.1 |
| yegs/rv2252/bmru family lipid kinase | EZ449_01400 | Not Available | Positive | 335979 - 336833 | 31365.3 |
| hypothetical protein | EZ449_01405 | Not Available | Negative | 337043 - 337432 | 15312.3 |
| energy transducer tonb | EZ449_01410 | Not Available | Negative | 337433 - 338086 | 24157.0 |
| peptidase m23 | EZ449_01415 | Not Available | Negative | 338141 - 338827 | 25797.1 |
| 30s ribosome-binding factor rbfa | EZ449_01420 | Not Available | Negative | 338828 - 339214 | 14715.4 |
| gtpase hflx | EZ449_01425 | Not Available | Negative | 339316 - 340512 | 45498.2 |
| indole-3-glycerol phosphate synthase trpc | EZ449_01430 | Not Available | Negative | 340850 - 341671 | 30009.0 |
| aminodeoxychorismate/anthranilate synthase component ii | EZ449_01435 | Not Available | Negative | 341758 - 342342 | 21823.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

