Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | EZ449_15095 | Not Available | Negative | 3514691 - 3516166 | 52318.0 |
| sodium-translocating pyrophosphatase | EZ449_15100 | Not Available | Negative | 3516283 - 3518529 | 78627.7 |
| amino acid permease | EZ449_15105 | Not Available | Positive | 3518779 - 3520215 | 52345.6 |
| tigr01212 family radical sam protein | EZ449_15110 | Not Available | Positive | 3520674 - 3521621 | 36018.5 |
| ammonium transporter | EZ449_15115 | Not Available | Positive | 3521967 - 3523355 | 49238.7 |
| porin | EZ449_15120 | Not Available | Positive | 3523395 - 3524411 | 36081.5 |
| duf4468 domain-containing protein | EZ449_15125 | Not Available | Positive | 3524506 - 3525087 | 22114.8 |
| hypothetical protein | EZ449_15130 | Not Available | Negative | 3525118 - 3525585 | 18223.3 |
| tlpa family protein disulfide reductase | EZ449_15135 | Not Available | Negative | 3525618 - 3526148 | 20184.4 |
| hypothetical protein | EZ449_15140 | Not Available | Negative | 3526198 - 3526671 | 17617.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

