Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | EZ449_15045 | Not Available | Positive | 3500392 - 3502293 | 72530.8 |
| lyse family translocator | EZ449_15050 | Not Available | Negative | 3503045 - 3503671 | 23198.3 |
| mfs transporter | EZ449_15055 | Not Available | Positive | 3503815 - 3505251 | 51252.6 |
| dcmp deaminase family protein | EZ449_15060 | Not Available | Positive | 3505314 - 3505781 | 16824.1 |
| glutamine-hydrolyzing gmp synthase | EZ449_15065 | Not Available | Positive | 3506024 - 3507553 | 56414.5 |
| amino acid abc transporter substrate-binding protein | EZ449_15070 | Not Available | Positive | 3507665 - 3508876 | 45838.3 |
| rsmb/nop family class i sam-dependent rna methyltransferase | EZ449_15075 | Not Available | Positive | 3508898 - 3510064 | 44743.8 |
| hypothetical protein | EZ449_15080 | Not Available | Negative | 3510382 - 3512511 | 81398.5 |
| marc family protein | EZ449_15085 | Not Available | Negative | 3512618 - 3513199 | 21215.0 |
| porin | EZ449_15090 | Not Available | Negative | 3513261 - 3514598 | 50028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

