Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_14995 | Not Available | Positive | 3486271 - 3487068 | 29729.9 |
| isoprenyl transferase | EZ449_15000 | Not Available | Positive | 3487088 - 3487828 | 28291.7 |
| outer membrane protein assembly factor bama | EZ449_15005 | Not Available | Positive | 3487981 - 3490521 | 94833.8 |
| omph family outer membrane protein | EZ449_15010 | Not Available | Positive | 3490713 - 3491243 | 20421.6 |
| omph family outer membrane protein | EZ449_15015 | Not Available | Positive | 3491305 - 3491883 | 20333.4 |
| glutamate racemase | EZ449_15020 | Not Available | Positive | 3492211 - 3493029 | 30572.7 |
| cytochrome-c peroxidase | EZ449_15025 | Not Available | Negative | 3493333 - 3494472 | 43082.7 |
| hypothetical protein | EZ449_15030 | Not Available | Negative | 3494476 - 3496032 | 59190.2 |
| duf4876 domain-containing protein | EZ449_15035 | Not Available | Negative | 3496066 - 3497397 | 48585.6 |
| tonb-dependent receptor | EZ449_15040 | Not Available | Negative | 3497401 - 3500181 | 102426.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

