Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m3 family oligoendopeptidase | EZ449_14945 | Not Available | Negative | 3477330 - 3479036 | 65772.9 |
| 4-hydroxybenzoate octaprenyltransferase | EZ449_14950 | Not Available | Negative | 3479139 - 3479996 | 32174.0 |
| yiha family ribosome biogenesis gtp-binding protein | EZ449_14955 | Not Available | Negative | 3480060 - 3480683 | 23589.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | EZ449_14960 | Not Available | Positive | 3480849 - 3481583 | 27533.3 |
| port family protein | EZ449_14965 | Not Available | Positive | 3481580 - 3482377 | 30347.2 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_14970 | Not Available | Positive | 3482471 - 3483229 | 27845.5 |
| gatb/yqey domain-containing protein | EZ449_14975 | Not Available | Positive | 3483303 - 3483749 | 16397.0 |
| alpha/beta hydrolase | EZ449_14980 | Not Available | Positive | 3483953 - 3484717 | 29156.5 |
| cbs domain-containing protein | EZ449_14985 | Not Available | Positive | 3484717 - 3485379 | 24743.2 |
| nad kinase | EZ449_14990 | Not Available | Positive | 3485387 - 3486268 | 32838.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

