Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | EZ449_14890 | Not Available | Negative | 3463589 - 3464434 | 30890.7 |
| thioredoxin-dependent thiol peroxidase | EZ449_14895 | Not Available | Negative | 3464492 - 3464956 | 17183.3 |
| m23 family metallopeptidase | EZ449_14900 | Not Available | Negative | 3465195 - 3466928 | 64075.2 |
| faa hydrolase family protein | EZ449_14905 | Not Available | Negative | 3466932 - 3467543 | 23128.7 |
| t9ss type a sorting domain-containing protein | EZ449_14910 | Not Available | Negative | 3467619 - 3468155 | 19810.4 |
| potassium transporter kup | EZ449_14915 | Not Available | Positive | 3468334 - 3470292 | 73631.5 |
| lpxtg cell wall anchor domain-containing protein | EZ449_14920 | Not Available | Positive | 3470296 - 3470451 | 5440.1 |
| amino acid permease | EZ449_14930 | Not Available | Negative | 3471084 - 3473033 | 70802.4 |
| mfs transporter | EZ449_14935 | Not Available | Positive | 3473334 - 3474554 | 45219.6 |
| tonb-dependent receptor | EZ449_14940 | Not Available | Negative | 3474558 - 3476984 | 91327.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

