Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EZ449_14840 | Not Available | Negative | 3450523 - 3451938 | 51980.2 |
| tonb-dependent receptor | EZ449_14845 | Not Available | Negative | 3451950 - 3454862 | 105529.0 |
| chromosome partitioning protein para | EZ449_14850 | Not Available | Negative | 3455153 - 3457057 | 74356.0 |
| hamp domain-containing histidine kinase | EZ449_14855 | Not Available | Negative | 3457121 - 3458425 | 49959.4 |
| response regulator transcription factor | EZ449_14860 | Not Available | Negative | 3458588 - 3459265 | 26032.3 |
| aspartate aminotransferase family protein | EZ449_14865 | Not Available | Negative | 3459369 - 3460499 | 41020.9 |
| hypothetical protein | EZ449_14870 | Not Available | Negative | 3460634 - 3461071 | 17124.9 |
| hypothetical protein | EZ449_14875 | Not Available | Negative | 3461163 - 3461840 | 25487.7 |
| sigma-70 family rna polymerase sigma factor | EZ449_14880 | Not Available | Negative | 3461856 - 3462416 | 21896.2 |
| transketolase family protein | EZ449_14885 | Not Available | Negative | 3462509 - 3463465 | 34441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

