Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | EZ449_14790 | Not Available | Negative | 3440176 - 3441132 | 36778.0 |
| duf3667 domain-containing protein | EZ449_14795 | Not Available | Positive | 3441289 - 3442116 | 31984.6 |
| abc transporter permease | EZ449_14800 | Not Available | Negative | 3442120 - 3443196 | 39301.2 |
| abc transporter atp-binding protein | EZ449_14805 | Not Available | Negative | 3443342 - 3444106 | 28540.5 |
| carbamoyl-phosphate synthase small subunit | EZ449_14810 | Not Available | Negative | 3444307 - 3445419 | 41169.1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EZ449_14815 | Not Available | Positive | 3445739 - 3446554 | 29617.9 |
| rlua family pseudouridine synthase | EZ449_14820 | Not Available | Positive | 3446790 - 3447476 | 26112.5 |
| hypothetical protein | EZ449_14825 | Not Available | Positive | 3447664 - 3448017 | 12413.6 |
| hypothetical protein | EZ449_14830 | Not Available | Negative | 3448130 - 3448603 | 17220.4 |
| glucosylceramidase | EZ449_14835 | Not Available | Negative | 3448881 - 3450320 | 52252.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

