Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamg domain-containing protein | EZ449_14730 | Not Available | Negative | 3422773 - 3423603 | 29676.9 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_14735 | Not Available | Negative | 3423623 - 3425107 | 54303.1 |
| tonb-dependent receptor | EZ449_14740 | Not Available | Negative | 3425119 - 3428133 | 107989.0 |
| rhodanese-related sulfurtransferase | EZ449_14755 | Not Available | Negative | 3431917 - 3432861 | 35406.2 |
| carboxypeptidase-like regulatory domain-containing protein | EZ449_14760 | Not Available | Negative | 3432991 - 3435435 | 93511.3 |
| glycine c-acetyltransferase | EZ449_14765 | Not Available | Positive | 3435682 - 3436869 | 43279.2 |
| phenylalanine--trna ligase subunit alpha | EZ449_14770 | Not Available | Positive | 3437340 - 3438380 | 39547.2 |
| hypothetical protein | EZ449_14775 | Not Available | Positive | 3438385 - 3438792 | 14514.5 |
| tetr/acrr family transcriptional regulator | EZ449_14780 | Not Available | Positive | 3438792 - 3439367 | 22042.5 |
| hypothetical protein | EZ449_14785 | Not Available | Negative | 3439437 - 3440120 | 25554.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

