Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EZ449_14680 | Not Available | Negative | 3407487 - 3410417 | 107166.0 |
| fecr family protein | EZ449_14685 | Not Available | Negative | 3410612 - 3411634 | 38457.8 |
| sigma-70 family rna polymerase sigma factor | EZ449_14690 | Not Available | Negative | 3411738 - 3412298 | 21959.4 |
| nad-dependent epimerase/dehydratase family protein | EZ449_14695 | Not Available | Positive | 3412500 - 3413447 | 35486.3 |
| yebc/pmpr family dna-binding transcriptional regulator | EZ449_14700 | Not Available | Positive | 3413538 - 3414266 | 27199.1 |
| phospholipase | EZ449_14705 | Not Available | Negative | 3414647 - 3415429 | 29548.7 |
| beta-glucosidase bglx | EZ449_14710 | Not Available | Negative | 3415497 - 3417794 | 83427.2 |
| xylosidase | EZ449_14715 | Not Available | Negative | 3417822 - 3419567 | 66304.1 |
| beta-glucosidase | EZ449_14720 | Not Available | Negative | 3419654 - 3421024 | 51947.4 |
| duf3131 domain-containing protein | EZ449_14725 | Not Available | Negative | 3421042 - 3422706 | 60960.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

