Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | EZ449_14630 | Not Available | Negative | 3396602 - 3397486 | 33124.7 |
| mfs transporter | EZ449_14635 | Not Available | Negative | 3397550 - 3398767 | 44604.7 |
| duf1080 domain-containing protein | EZ449_14640 | Not Available | Negative | 3398883 - 3399563 | 25069.9 |
| gfo/idh/moca family oxidoreductase | EZ449_14645 | Not Available | Negative | 3399685 - 3401142 | 54153.4 |
| c-type cytochrome | EZ449_14650 | Not Available | Negative | 3401174 - 3401557 | 13785.5 |
| sugar phosphate isomerase/epimerase | EZ449_14655 | Not Available | Negative | 3401654 - 3402712 | 39644.6 |
| gfo/idh/moca family oxidoreductase | EZ449_14660 | Not Available | Negative | 3402721 - 3403878 | 41949.4 |
| gmc family oxidoreductase | EZ449_14665 | Not Available | Negative | 3403960 - 3405663 | 64586.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | EZ449_14670 | Not Available | Negative | 3405685 - 3406269 | 21385.8 |
| twin-arginine translocation signal domain-containing protein | EZ449_14675 | Not Available | Negative | 3406537 - 3407442 | 33600.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

