Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | EZ449_01340 | Not Available | Positive | 320277 - 323807 | 125965.0 |
| type ix secretion system membrane protein porp/sprf | EZ449_01345 | Not Available | Negative | 323804 - 324814 | 37061.9 |
| dead/deah box helicase | EZ449_01350 | Not Available | Positive | 325103 - 327994 | 111528.0 |
| duf2892 domain-containing protein | EZ449_01355 | Not Available | Positive | 328514 - 328828 | 11322.5 |
| duf1080 domain-containing protein | EZ449_01360 | Not Available | Positive | 328897 - 329679 | 28933.2 |
| duf1211 domain-containing protein | EZ449_01365 | Not Available | Positive | 329788 - 330387 | 22512.9 |
| leucyl/phenylalanyl-trna--protein transferase | EZ449_01370 | Not Available | Negative | 330384 - 331019 | 23813.6 |
| duf1800 domain-containing protein | EZ449_01375 | Not Available | Positive | 331093 - 332535 | 54930.5 |
| duf1501 domain-containing protein | EZ449_01380 | Not Available | Positive | 332608 - 333807 | 45014.5 |
| hypothetical protein | EZ449_01385 | Not Available | Negative | 333933 - 334286 | 13185.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

