Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EZ449_14580 | Not Available | Positive | 3388301 - 3388930 | 23701.9 |
| hypothetical protein | EZ449_14585 | Not Available | Positive | 3388930 - 3390039 | 43852.4 |
| hypothetical protein | EZ449_14590 | Not Available | Positive | 3390063 - 3390608 | 20268.1 |
| hypothetical protein | EZ449_14595 | Not Available | Negative | 3390735 - 3391094 | 13339.4 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EZ449_14600 | Not Available | Negative | 3391106 - 3392515 | 51058.1 |
| hypothetical protein | EZ449_14605 | Not Available | Positive | 3392707 - 3392904 | 7614.42 |
| cdp-alcohol phosphatidyltransferase family protein | EZ449_14610 | Not Available | Negative | 3392908 - 3393510 | 22704.7 |
| aspartate-semialdehyde dehydrogenase | EZ449_14615 | Not Available | Negative | 3393573 - 3394562 | 36384.2 |
| hypothetical protein | EZ449_14620 | Not Available | Positive | 3394612 - 3395631 | 37265.5 |
| sugar phosphate isomerase/epimerase | EZ449_14625 | Not Available | Negative | 3395736 - 3396605 | 32114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

