Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | EZ449_14480 | Not Available | Negative | 3365904 - 3366818 | 35664.2 |
| alpha-1,2-fucosyltransferase | EZ449_14485 | Not Available | Negative | 3366803 - 3367639 | 32510.1 |
| duf268 domain-containing protein | EZ449_14490 | Not Available | Negative | 3367641 - 3368264 | 23080.3 |
| atp-binding protein | EZ449_14495 | Not Available | Negative | 3368274 - 3368474 | 7639.26 |
| methionine-r-sulfoxide reductase | EZ449_14500 | Not Available | Positive | 3368915 - 3369409 | 18288.7 |
| septal ring lytic transglycosylase rlpa family protein | EZ449_14505 | Not Available | Positive | 3369632 - 3370012 | 14117.0 |
| ribonucleoside-diphosphate reductase | EZ449_14510 | Not Available | Positive | 3370468 - 3371439 | 37236.3 |
| ribonucleoside-diphosphate reductase subunit alpha | EZ449_14515 | Not Available | Positive | 3371599 - 3373983 | 89163.5 |
| hypothetical protein | EZ449_14520 | Not Available | Positive | 3374208 - 3374426 | 8260.89 |
| flotillin family protein | EZ449_14525 | Not Available | Positive | 3374963 - 3376927 | 71496.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

