Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system outer membrane channel protein porv | EZ449_14330 | Not Available | Negative | 3329660 - 3330850 | 42731.0 |
| hypothetical protein | EZ449_14335 | Not Available | Positive | 3331201 - 3335739 | 158653.0 |
| duf2341 domain-containing protein | EZ449_14340 | Not Available | Positive | 3335992 - 3341100 | 181448.0 |
| hypothetical protein | EZ449_14345 | Not Available | Positive | 3341111 - 3341341 | 8578.68 |
| colanic acid biosynthesis acetyltransferase wcaf | EZ449_14350 | Not Available | Negative | 3341373 - 3341924 | 20410.0 |
| glycosyltransferase | EZ449_14355 | Not Available | Negative | 3341932 - 3343383 | 56913.5 |
| glycosyltransferase | EZ449_14360 | Not Available | Negative | 3343376 - 3344608 | 46139.9 |
| hypothetical protein | EZ449_14365 | Not Available | Negative | 3344548 - 3345984 | 54917.0 |
| glycosyltransferase | EZ449_14370 | Not Available | Negative | 3345981 - 3347135 | 44003.9 |
| hypothetical protein | EZ449_14375 | Not Available | Negative | 3347132 - 3348364 | 47387.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

