Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer family protein | EZ449_14280 | Not Available | Positive | 3319995 - 3321971 | 73553.2 |
| hypothetical protein | EZ449_14285 | Not Available | Positive | 3322009 - 3322422 | 14997.5 |
| m23 family metallopeptidase | EZ449_14290 | Not Available | Positive | 3322419 - 3322910 | 17991.2 |
| duf1738 domain-containing protein | EZ449_14295 | Not Available | Positive | 3323051 - 3324265 | 45704.5 |
| duf4099 domain-containing protein | EZ449_14300 | Not Available | Positive | 3324270 - 3325049 | 29358.3 |
| hypothetical protein | EZ449_14305 | Not Available | Positive | 3325091 - 3325912 | 31555.7 |
| crp/fnr family transcriptional regulator | EZ449_14310 | Not Available | Negative | 3326086 - 3326706 | 24079.4 |
| helix-turn-helix domain-containing protein | EZ449_14315 | Not Available | Negative | 3326869 - 3328083 | 46514.5 |
| class i sam-dependent methyltransferase | EZ449_14320 | Not Available | Positive | 3328292 - 3328918 | 24429.2 |
| polysaccharide deacetylase family protein | EZ449_14325 | Not Available | Negative | 3328908 - 3329657 | 28233.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

