Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EZ449_14130 | Not Available | Negative | 3293852 - 3294580 | 27701.9 |
| xre family transcriptional regulator | EZ449_14135 | Not Available | Negative | 3294663 - 3295028 | 13723.9 |
| susc/raga family tonb-linked outer membrane protein | EZ449_14140 | Not Available | Positive | 3295989 - 3299393 | 125808.0 |
| hypothetical protein | EZ449_14145 | Not Available | Positive | 3299365 - 3300357 | 37199.9 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_14150 | Not Available | Positive | 3300300 - 3300785 | 18404.4 |
| tlpa family protein disulfide reductase | EZ449_14155 | Not Available | Positive | 3300775 - 3301428 | 24566.9 |
| hypothetical protein | EZ449_14160 | Not Available | Negative | 3301476 - 3301775 | 10656.6 |
| hypothetical protein | EZ449_14165 | Not Available | Negative | 3301904 - 3302392 | 18538.5 |
| crp/fnr family transcriptional regulator | EZ449_14170 | Not Available | Negative | 3302495 - 3303070 | 22101.7 |
| hypothetical protein | EZ449_14175 | Not Available | Negative | 3303159 - 3304301 | 43681.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

