Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf417 family protein | EZ449_14075 | Not Available | Negative | 3283863 - 3284315 | 16620.0 |
| molybdopterin-binding oxidoreductase | EZ449_14080 | Not Available | Negative | 3284385 - 3285170 | 29844.7 |
| thiosulfate reductase | EZ449_14085 | Not Available | Negative | 3285176 - 3285895 | 28449.2 |
| duf1223 domain-containing protein | EZ449_14090 | Not Available | Negative | 3285934 - 3286737 | 29162.1 |
| sigma-70 family rna polymerase sigma factor | EZ449_14095 | Not Available | Positive | 3286895 - 3287482 | 22581.7 |
| hypothetical protein | EZ449_14100 | Not Available | Positive | 3287494 - 3287784 | 11327.9 |
| hypothetical protein | EZ449_14105 | Not Available | Positive | 3287948 - 3288217 | 9688.09 |
| cbs domain-containing protein | EZ449_14110 | Not Available | Positive | 3288410 - 3288868 | 17526.0 |
| hypothetical protein | EZ449_14120 | Not Available | Positive | 3291852 - 3292040 | 7191.91 |
| hypothetical protein | EZ449_14125 | Not Available | Negative | 3292516 - 3293598 | 41765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

