Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | EZ449_14025 | Not Available | Negative | 3273218 - 3274501 | 48530.4 |
| helix-turn-helix domain-containing protein | EZ449_14030 | Not Available | Negative | 3274501 - 3274851 | 13294.3 |
| rida family protein | EZ449_14035 | Not Available | Negative | 3275189 - 3275593 | 14788.9 |
| redoxin domain-containing protein | EZ449_14040 | Not Available | Negative | 3275753 - 3276451 | 24652.0 |
| carbon-nitrogen hydrolase family protein | EZ449_14045 | Not Available | Positive | 3276607 - 3277560 | 35103.9 |
| thioredoxin family protein | EZ449_14050 | Not Available | Positive | 3277674 - 3279662 | 73151.8 |
| duf255 domain-containing protein | EZ449_14055 | Not Available | Positive | 3279692 - 3280165 | 17674.3 |
| arac family transcriptional regulator | EZ449_14060 | Not Available | Positive | 3280228 - 3281133 | 34679.6 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_14065 | Not Available | Positive | 3281212 - 3282078 | 31465.7 |
| hypothetical protein | EZ449_14070 | Not Available | Negative | 3282184 - 3283494 | 45823.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

