Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase family protein subunit m | EZ449_13815 | Not Available | Negative | 3227905 - 3228918 | 36177.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EZ449_13820 | Not Available | Negative | 3228934 - 3229713 | 28092.0 |
| alpha/beta hydrolase | EZ449_13825 | Not Available | Negative | 3230162 - 3231109 | 35064.4 |
| hypothetical protein | EZ449_13830 | Not Available | Positive | 3231876 - 3232436 | 21013.8 |
| hypothetical protein | EZ449_13840 | Not Available | Negative | 3233358 - 3235055 | 65679.9 |
| hypothetical protein | EZ449_13845 | Not Available | Negative | 3236036 - 3237088 | 41724.1 |
| duf4142 domain-containing protein | EZ449_13850 | Not Available | Positive | 3237588 - 3237845 | 9833.13 |
| hypothetical protein | EZ449_13855 | Not Available | Positive | 3238157 - 3238384 | 8163.0 |
| mobile mystery protein b | EZ449_13865 | Not Available | Negative | 3240262 - 3240858 | 23137.7 |
| xre family transcriptional regulator | EZ449_13870 | Not Available | Negative | 3240849 - 3241313 | 17498.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

