Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 3195086 - 3195175 | Not Available |
| doxx family membrane protein | EZ449_13665 | Not Available | Negative | 3195319 - 3195753 | 16248.5 |
| response regulator | EZ449_13675 | Not Available | Negative | 3199405 - 3199824 | 16043.8 |
| hypothetical protein | EZ449_13680 | Not Available | Positive | 3200037 - 3200462 | 16241.5 |
| hypothetical protein | EZ449_13685 | Not Available | Negative | 3200516 - 3200902 | 14603.7 |
| beta-glycosidase | EZ449_13690 | Not Available | Positive | 3201383 - 3202942 | 58660.7 |
| cold-shock protein | EZ449_13695 | Not Available | Positive | 3203664 - 3203858 | 7227.94 |
| response regulator transcription factor | EZ449_13700 | Not Available | Positive | 3204512 - 3204736 | 8223.12 |
| glycosyltransferase | EZ449_13705 | Not Available | Positive | 3205335 - 3206528 | 45391.9 |
| hypothetical protein | EZ449_13710 | Not Available | Positive | 3206528 - 3207343 | 30244.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

