Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | EZ449_01245 | Not Available | Positive | 298851 - 299228 | 14730.9 |
| tonb family protein | EZ449_01250 | Not Available | Positive | 299225 - 301246 | 76162.5 |
| hypothetical protein | EZ449_01255 | Not Available | Positive | 301259 - 301912 | 23427.4 |
| energy transducer tonb | EZ449_01260 | Not Available | Positive | 301940 - 302473 | 20059.6 |
| hypothetical protein | EZ449_01265 | Not Available | Positive | 302525 - 302674 | 5396.59 |
| energy transducer tonb | EZ449_01270 | Not Available | Positive | 302833 - 303258 | 15945.2 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | EZ449_01275 | Not Available | Negative | 303659 - 304429 | 27788.4 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | EZ449_01280 | Not Available | Negative | 304538 - 306517 | 73021.5 |
| succinate dehydrogenase cytochrome b subunit | EZ449_01285 | Not Available | Negative | 306535 - 307215 | 25107.3 |
| hypothetical protein | EZ449_01290 | Not Available | Positive | 307613 - 307807 | 7471.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

