Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | EZ449_13495 | Not Available | Negative | 3157488 - 3158825 | 49726.2 |
| pig-l family deacetylase | EZ449_13500 | Not Available | Positive | 3159080 - 3161548 | 91576.0 |
| hypothetical protein | EZ449_13505 | Not Available | Positive | 3161612 - 3161833 | 8315.3 |
| putative toxin-antitoxin system toxin component, pin family | EZ449_13510 | Not Available | Positive | 3161814 - 3162248 | 16779.4 |
| sodium:solute symporter | EZ449_13515 | Not Available | Positive | 3162367 - 3164058 | 62800.1 |
| duf2911 domain-containing protein | EZ449_13520 | Not Available | Positive | 3164094 - 3164612 | 18876.9 |
| alpha-mannosidase | EZ449_13525 | Not Available | Positive | 3165359 - 3167443 | 78034.4 |
| hypothetical protein | EZ449_13530 | Not Available | Positive | 3167538 - 3167729 | 6937.34 |
| hypothetical protein | EZ449_13535 | Not Available | Positive | 3168359 - 3168616 | 9185.47 |
| nudix domain-containing protein | EZ449_13545 | Not Available | Positive | 3169014 - 3169469 | 17027.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

