Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EZ449_13445 | Not Available | Negative | 3144568 - 3146202 | 62297.6 |
| hypothetical protein | EZ449_13450 | Not Available | Positive | 3146249 - 3146701 | 16946.3 |
| duf2891 domain-containing protein | EZ449_13455 | Not Available | Positive | 3146789 - 3147862 | 40876.2 |
| pas domain-containing protein | EZ449_13460 | Not Available | Negative | 3147927 - 3149678 | 66178.8 |
| sensor protein kdpd | EZ449_13465 | Not Available | Negative | 3149907 - 3151028 | 42427.9 |
| porin | EZ449_13470 | Not Available | Negative | 3151120 - 3152190 | 39286.1 |
| k(+)-transporting atpase subunit c | EZ449_13475 | Not Available | Negative | 3152423 - 3152983 | 19791.3 |
| k(+)-transporting atpase subunit b | EZ449_13480 | Not Available | Negative | 3153084 - 3155111 | 71804.6 |
| potassium-transporting atpase subunit kdpa | EZ449_13485 | Not Available | Negative | 3155236 - 3156954 | 62173.7 |
| potassium-transporting atpase subunit f | EZ449_13490 | Not Available | Negative | 3156992 - 3157069 | 2960.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

