Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | EZ449_13345 | Not Available | Positive | 3117399 - 3118001 | 21153.2 |
| m28 family peptidase | EZ449_13350 | Not Available | Negative | 3119154 - 3120803 | 60517.2 |
| hypothetical protein | EZ449_13355 | Not Available | Positive | 3121545 - 3121778 | 8511.18 |
| hypothetical protein | EZ449_13360 | Not Available | Positive | 3122333 - 3122641 | 12286.1 |
| hypothetical protein | EZ449_13365 | Not Available | Positive | 3122932 - 3123423 | 18948.9 |
| hypothetical protein | EZ449_13370 | Not Available | Positive | 3123593 - 3125542 | 74260.9 |
| hypothetical protein | EZ449_13375 | Not Available | Positive | 3125578 - 3125807 | 8680.59 |
| transposase | EZ449_13380 | Not Available | Negative | 3125808 - 3126274 | 18009.5 |
| phosphoheptose isomerase | EZ449_13385 | Not Available | Positive | 3126696 - 3127193 | 18859.0 |
| acyl-coa desaturase | EZ449_13390 | Not Available | Positive | 3127330 - 3128058 | 29418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

