Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | EZ449_13295 | Not Available | Negative | 3104122 - 3104733 | 23650.9 |
| orotate phosphoribosyltransferase | EZ449_13300 | Not Available | Positive | 3104732 - 3105391 | 24015.8 |
| srpbcc family protein | EZ449_13305 | Not Available | Positive | 3105439 - 3105837 | 14975.0 |
| alpha-rhamnosidase | EZ449_13310 | Not Available | Positive | 3105988 - 3108648 | 99520.1 |
| alpha-l-rhamnosidase | EZ449_13315 | Not Available | Positive | 3108650 - 3110350 | 63785.6 |
| is200/is605 family transposase | EZ449_13320 | Not Available | Positive | 3110401 - 3110868 | 18342.8 |
| atp-dependent chaperone clpb | EZ449_13325 | Not Available | Positive | 3111390 - 3113990 | 97599.7 |
| hypothetical protein | EZ449_13330 | Not Available | Positive | 3114145 - 3114801 | 24845.5 |
| mfs transporter | EZ449_13335 | Not Available | Negative | 3114911 - 3116113 | 43263.9 |
| nad(p)h-dependent oxidoreductase | EZ449_13340 | Not Available | Positive | 3116217 - 3116774 | 20135.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

