Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EZ449_13245 | Not Available | Negative | 3093406 - 3095142 | 63865.3 |
| rna-binding protein | EZ449_13250 | Not Available | Positive | 3095673 - 3096518 | 31859.8 |
| hypothetical protein | EZ449_13255 | Not Available | Negative | 3096647 - 3097312 | 25043.8 |
| atp-dependent endonuclease | EZ449_13260 | Not Available | Negative | 3097514 - 3098947 | 54768.7 |
| hypothetical protein | EZ449_13265 | Not Available | Negative | 3099310 - 3100449 | 41718.4 |
| duf3822 family protein | EZ449_13270 | Not Available | Positive | 3100707 - 3101513 | 30420.6 |
| methyltransferase domain-containing protein | EZ449_13275 | Not Available | Positive | 3101504 - 3102040 | 20099.3 |
| pantetheine-phosphate adenylyltransferase | EZ449_13280 | Not Available | Positive | 3102232 - 3102702 | 17587.4 |
| sigma-70 family rna polymerase sigma factor | EZ449_13285 | Not Available | Positive | 3102869 - 3103372 | 19729.8 |
| hypothetical protein | EZ449_13290 | Not Available | Positive | 3103362 - 3103970 | 24237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

