Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | EZ449_13145 | Not Available | Positive | 3073125 - 3074270 | 43680.6 |
| amine oxidase | EZ449_13150 | Not Available | Positive | 3074270 - 3075445 | 44588.4 |
| hypothetical protein | EZ449_13155 | Not Available | Negative | 3075558 - 3075842 | 11030.3 |
| voc family protein | EZ449_13160 | Not Available | Negative | 3075980 - 3076357 | 14156.8 |
| dinb family protein | EZ449_13165 | Not Available | Negative | 3076468 - 3076938 | 17819.2 |
| aminotransferase class v-fold plp-dependent enzyme | EZ449_13170 | Not Available | Positive | 3077044 - 3078120 | 40545.3 |
| l-histidine n(alpha)-methyltransferase | EZ449_13175 | Not Available | Negative | 3078122 - 3079096 | 37221.9 |
| ergothioneine biosynthesis protein egtb | EZ449_13180 | Not Available | Negative | 3079103 - 3080251 | 45059.8 |
| abc transporter permease subunit | EZ449_13185 | Not Available | Negative | 3080251 - 3081822 | 57568.5 |
| abc transporter atp-binding protein | EZ449_13190 | Not Available | Negative | 3081815 - 3082777 | 36217.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

