Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_13095 | Not Available | Negative | 3061093 - 3063411 | 87673.8 |
| transketolase | EZ449_13100 | Not Available | Negative | 3063641 - 3066064 | 89811.8 |
| duf1573 domain-containing protein | EZ449_13105 | Not Available | Positive | 3066233 - 3066631 | 14053.1 |
| pyridoxal phosphate-dependent aminotransferase | EZ449_13110 | Not Available | Positive | 3066693 - 3067886 | 44249.1 |
| Tmrna,resume consensus sequence (at 89): tttagttggcgaaaatac | Not Available | Not Available | Positive | 3068061 - 3068424 | Not Available |
| response regulator transcription factor | EZ449_13120 | Not Available | Negative | 3068536 - 3069183 | 24001.4 |
| manganese catalase family protein | EZ449_13125 | Not Available | Negative | 3069351 - 3070292 | 34885.1 |
| hypothetical protein | EZ449_13130 | Not Available | Negative | 3070460 - 3071062 | 22230.2 |
| ferritin-like domain-containing protein | EZ449_13135 | Not Available | Positive | 3071269 - 3071862 | 21480.4 |
| udp-galactopyranose mutase | EZ449_13140 | Not Available | Positive | 3071981 - 3073105 | 43749.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

