Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_01195 | Not Available | Positive | 290700 - 290957 | 9215.53 |
| atp-binding cassette domain-containing protein | EZ449_01200 | Not Available | Positive | 290963 - 291871 | 33112.5 |
| abc transporter permease | EZ449_01205 | Not Available | Positive | 291873 - 292670 | 30127.7 |
| m20/m25/m40 family metallo-hydrolase | EZ449_01210 | Not Available | Positive | 293223 - 294788 | 56809.8 |
| luxr family transcriptional regulator | EZ449_01215 | Not Available | Negative | 294893 - 295123 | 8983.93 |
| hypothetical protein | EZ449_01220 | Not Available | Positive | 295420 - 295806 | 13904.3 |
| hypothetical protein | EZ449_01225 | Not Available | Positive | 295810 - 296457 | 25539.8 |
| hypothetical protein | EZ449_01230 | Not Available | Positive | 296424 - 297215 | 29806.6 |
| response regulator transcription factor | EZ449_01235 | Not Available | Positive | 297221 - 297862 | 23733.1 |
| luxr family transcriptional regulator | EZ449_01240 | Not Available | Negative | 297932 - 298612 | 25705.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

