Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dehydrogenase | EZ449_13045 | Not Available | Negative | 3050081 - 3051268 | 44885.2 |
| rna-binding s4 domain-containing protein | EZ449_13050 | Not Available | Positive | 3051361 - 3051567 | 7496.4 |
| 3-dehydroquinate synthase | EZ449_13055 | Not Available | Positive | 3051567 - 3052625 | 39331.1 |
| sterol desaturase family protein | EZ449_13060 | Not Available | Positive | 3052627 - 3053592 | 38064.1 |
| prephenate dehydratase | EZ449_13065 | Not Available | Positive | 3054747 - 3055580 | 31589.1 |
| 3-deoxy-7-phosphoheptulonate synthase | EZ449_13070 | Not Available | Positive | 3055686 - 3056825 | 41913.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EZ449_13075 | Not Available | Positive | 3056989 - 3058257 | 46104.7 |
| chorismate synthase | EZ449_13080 | Not Available | Positive | 3058332 - 3059429 | 38979.5 |
| duf1684 domain-containing protein | EZ449_13085 | Not Available | Positive | 3059601 - 3060209 | 23390.9 |
| response regulator transcription factor | EZ449_13090 | Not Available | Positive | 3060337 - 3061092 | 29017.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

