Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein | EZ449_12995 | Not Available | Negative | 3040997 - 3041194 | 7121.55 |
| cold shock domain-containing protein | EZ449_13000 | Not Available | Negative | 3041196 - 3041381 | 6778.1 |
| aldo/keto reductase | EZ449_13005 | Not Available | Negative | 3041569 - 3042579 | 36880.0 |
| arac family transcriptional regulator | EZ449_13010 | Not Available | Negative | 3042677 - 3043495 | 30975.1 |
| cold shock domain-containing protein | EZ449_13015 | Not Available | Negative | 3043898 - 3044122 | 8235.23 |
| hypothetical protein | EZ449_13020 | Not Available | Positive | 3044333 - 3044515 | 6881.29 |
| pqq-dependent sugar dehydrogenase | EZ449_13025 | Not Available | Positive | 3044588 - 3046012 | 52886.9 |
| pkd domain-containing protein | EZ449_13030 | Not Available | Positive | 3046100 - 3048808 | 99355.5 |
| had family phosphatase | EZ449_13035 | Not Available | Positive | 3048919 - 3049554 | 24478.1 |
| duf962 domain-containing protein | EZ449_13040 | Not Available | Positive | 3049563 - 3049892 | 12743.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

