Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3025872 - 3025945 | Not Available |
| glycoside hydrolase family 92 protein | EZ449_12950 | Not Available | Negative | 3026050 - 3028293 | 85488.0 |
| atp-dependent dna helicase uvrd2 | EZ449_12955 | Not Available | Positive | 3028481 - 3030580 | 79249.0 |
| hypothetical protein | EZ449_12960 | Not Available | Negative | 3030585 - 3031553 | 36681.8 |
| hsp70 family protein | EZ449_12965 | Not Available | Positive | 3031710 - 3032978 | 47721.7 |
| hypothetical protein | EZ449_12970 | Not Available | Negative | 3032990 - 3033190 | 7380.39 |
| sulfatase | EZ449_12975 | Not Available | Negative | 3033241 - 3034659 | 52242.9 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_12980 | Not Available | Negative | 3034857 - 3036359 | 56078.4 |
| tonb-dependent receptor | EZ449_12985 | Not Available | Negative | 3036370 - 3039510 | 114999.0 |
| arac family transcriptional regulator | EZ449_12990 | Not Available | Negative | 3040062 - 3040835 | 29415.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

