Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | EZ449_12890 | Not Available | Negative | 3009351 - 3011375 | 76087.3 |
| hypothetical protein | EZ449_12895 | Not Available | Negative | 3011381 - 3011566 | 7015.67 |
| glycoside hydrolase family 97 protein | EZ449_12900 | Not Available | Negative | 3012431 - 3014467 | 77221.9 |
| alpha-amylase | EZ449_12905 | Not Available | Negative | 3014597 - 3015979 | 50825.7 |
| susf/suse family outer membrane protein | EZ449_12910 | Not Available | Negative | 3016023 - 3017099 | 38174.9 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_12915 | Not Available | Negative | 3017110 - 3018594 | 54811.6 |
| susc/raga family tonb-linked outer membrane protein | EZ449_12920 | Not Available | Negative | 3018603 - 3021557 | 106342.0 |
| hypothetical protein | EZ449_12925 | Not Available | Positive | 3021961 - 3023286 | 49926.1 |
| tetratricopeptide repeat protein | EZ449_12930 | Not Available | Negative | 3023287 - 3024927 | 63078.7 |
| hypothetical protein | EZ449_12940 | Not Available | Positive | 3025333 - 3025551 | 7950.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

