Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_12835 | Not Available | Positive | 2995795 - 2996139 | 13084.1 |
| glycosyl hydrolase | EZ449_12840 | Not Available | Positive | 2996549 - 2999539 | 112679.0 |
| hypothetical protein | EZ449_12845 | Not Available | Positive | 2999684 - 3000046 | 13616.4 |
| abc transporter permease | EZ449_12850 | Not Available | Positive | 3000037 - 3000846 | 29199.9 |
| atp-binding cassette domain-containing protein | EZ449_12855 | Not Available | Positive | 3000850 - 3001623 | 28981.9 |
| mce family protein | EZ449_12860 | Not Available | Positive | 3001626 - 3002597 | 35269.9 |
| hypothetical protein | EZ449_12865 | Not Available | Negative | 3002724 - 3004730 | 74170.3 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_12870 | Not Available | Positive | 3004972 - 3005817 | 30370.8 |
| arac family transcriptional regulator | EZ449_12875 | Not Available | Positive | 3005850 - 3006746 | 34533.4 |
| helix-turn-helix domain-containing protein | EZ449_12880 | Not Available | Positive | 3006907 - 3007104 | 7567.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

