Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf808 domain-containing protein | EZ449_12785 | Not Available | Negative | 2986951 - 2987820 | 31010.1 |
| hypothetical protein | EZ449_12790 | Not Available | Negative | 2987946 - 2988233 | 11142.9 |
| metallophosphoesterase | EZ449_12795 | Not Available | Negative | 2988468 - 2989310 | 31716.6 |
| peroxiredoxin family protein | EZ449_12800 | Not Available | Negative | 2989492 - 2990073 | 21602.0 |
| hypothetical protein | EZ449_12805 | Not Available | Negative | 2990313 - 2990546 | 8883.97 |
| hypothetical protein | EZ449_12810 | Not Available | Positive | 2991523 - 2991804 | 11084.0 |
| dash family cryptochrome | EZ449_12815 | Not Available | Negative | 2991974 - 2993365 | 54620.0 |
| sdr family oxidoreductase | EZ449_12820 | Not Available | Negative | 2993698 - 2994441 | 25562.6 |
| transcriptional regulator | EZ449_12825 | Not Available | Positive | 2994546 - 2994896 | 13223.2 |
| duf421 domain-containing protein | EZ449_12830 | Not Available | Negative | 2994915 - 2995610 | 26052.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

