Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | EZ449_12735 | Not Available | Negative | 2965833 - 2968247 | 93195.8 |
| hypothetical protein | EZ449_12740 | Not Available | Negative | 2968387 - 2971992 | 137374.0 |
| sdia-regulated family protein | EZ449_12745 | Not Available | Negative | 2972032 - 2972760 | 26293.1 |
| polyphosphate kinase 1 | EZ449_12750 | Not Available | Negative | 2973090 - 2975123 | 78304.1 |
| hd domain-containing protein | EZ449_12755 | Not Available | Negative | 2975132 - 2976349 | 46517.4 |
| alkaline phosphatase family protein | EZ449_12760 | Not Available | Negative | 2977056 - 2978411 | 49361.6 |
| hypothetical protein | EZ449_12765 | Not Available | Negative | 2978527 - 2980065 | 54674.1 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EZ449_12770 | Not Available | Negative | 2980080 - 2981645 | 58593.6 |
| susc/raga family tonb-linked outer membrane protein | EZ449_12775 | Not Available | Negative | 2981657 - 2984848 | 116022.0 |
| hypothetical protein | EZ449_12780 | Not Available | Positive | 2985802 - 2986935 | 41795.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

