Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | EZ449_12685 | Not Available | Negative | 2950849 - 2952384 | 56462.7 |
| peptidase s8 | EZ449_12690 | Not Available | Negative | 2952386 - 2954011 | 59621.0 |
| tlpa family protein disulfide reductase | EZ449_12695 | Not Available | Negative | 2954048 - 2955469 | 52971.5 |
| hypothetical protein | EZ449_12700 | Not Available | Negative | 2955475 - 2956332 | 32322.4 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_12705 | Not Available | Negative | 2956350 - 2957810 | 54269.4 |
| susc/raga family tonb-linked outer membrane protein | EZ449_12710 | Not Available | Negative | 2957821 - 2960940 | 114462.0 |
| hypothetical protein | EZ449_12715 | Not Available | Negative | 2960986 - 2961438 | 16493.2 |
| fecr family protein | EZ449_12720 | Not Available | Negative | 2961492 - 2962649 | 43088.6 |
| rna polymerase sigma-70 factor | EZ449_12725 | Not Available | Negative | 2962769 - 2963329 | 21361.7 |
| alkaline phosphatase family protein | EZ449_12730 | Not Available | Positive | 2963564 - 2965510 | 74734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

