Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type b sorting domain-containing protein | EZ449_12635 | Not Available | Negative | 2939682 - 2943242 | 128451.0 |
| hypothetical protein | EZ449_12640 | Not Available | Positive | 2943529 - 2943924 | 15549.5 |
| hypothetical protein | EZ449_12645 | Not Available | Negative | 2943936 - 2944148 | 7877.6 |
| twin-arginine translocase tata/tate family subunit | EZ449_12650 | Not Available | Negative | 2944205 - 2944345 | 5035.51 |
| hd domain-containing protein | EZ449_12655 | Not Available | Negative | 2944415 - 2945269 | 32071.9 |
| tetr/acrr family transcriptional regulator | EZ449_12660 | Not Available | Positive | 2945497 - 2946150 | 25714.4 |
| aarf/abc1/ubib kinase family protein | EZ449_12665 | Not Available | Positive | 2946156 - 2947460 | 50258.9 |
| response regulator | EZ449_12670 | Not Available | Negative | 2947461 - 2947817 | 13122.5 |
| hypothetical protein | EZ449_12675 | Not Available | Positive | 2948271 - 2948873 | 21307.7 |
| gmc family oxidoreductase | EZ449_12680 | Not Available | Positive | 2949113 - 2950777 | 63078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

