Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_01145 | Not Available | Negative | 279864 - 280043 | 6529.5 |
| phosphoglycerate dehydrogenase | EZ449_01150 | Not Available | Negative | 280143 - 281069 | 34656.6 |
| tonb-dependent receptor | EZ449_01155 | Not Available | Positive | 281377 - 283866 | 91601.4 |
| tonb-dependent receptor | EZ449_01160 | Not Available | Positive | 283929 - 286364 | 89972.1 |
| nudix hydrolase | EZ449_01165 | Not Available | Positive | 286401 - 286955 | 20946.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EZ449_01170 | Not Available | Positive | 286988 - 287728 | 28324.8 |
| trab/gumn family protein | EZ449_01175 | Not Available | Positive | 287730 - 288383 | 24627.0 |
| hypothetical protein | EZ449_01180 | Not Available | Positive | 288368 - 288607 | 9082.04 |
| response regulator transcription factor | EZ449_01185 | Not Available | Negative | 288610 - 289359 | 28531.9 |
| histidine kinase | EZ449_01190 | Not Available | Negative | 289421 - 290452 | 39566.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

