Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent transcriptional regulator | EZ449_12535 | Not Available | Positive | 2919867 - 2920529 | 24952.9 |
| iron/manganese transporter | EZ449_12540 | Not Available | Positive | 2920516 - 2922378 | 68399.7 |
| redoxin domain-containing protein | EZ449_12545 | Not Available | Negative | 2922382 - 2922861 | 18298.7 |
| ssra-binding protein | EZ449_12550 | Not Available | Positive | 2923081 - 2923530 | 17490.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EZ449_12555 | Not Available | Negative | 2923599 - 2924255 | 24486.8 |
| primosomal protein n' | EZ449_12560 | Not Available | Negative | 2924349 - 2926829 | 93945.6 |
| duf423 domain-containing protein | EZ449_12565 | Not Available | Negative | 2926829 - 2927215 | 14383.0 |
| hypothetical protein | EZ449_12570 | Not Available | Positive | 2927305 - 2928873 | 60085.8 |
| hypothetical protein | EZ449_12575 | Not Available | Positive | 2928904 - 2930313 | 52884.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EZ449_12580 | Not Available | Negative | 2930316 - 2931002 | 25056.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

